2014 Publications

  1. R R Garlapati, A Roy, G R Joldes, A Wittek, A Mostayed, B Doyle, S K Warfield, R Kikinis, N Knuckey, S Bunt, K Miller. More accurate neuronavigation data provided by biomechanical modeling instead of rigid registration. J Neurosurg. 2014 Jun;120(6):1477-83. Epub 2014 Jan 24.

  2. A Suinesiaputra, B R Cowan, A O Al-Agamy, M A Elattar, N Ayache, A S Fahmy, A M Khalifa, P Medrano-Gracia, M P Jolly, A H Kadish, D C Lee, J Margeta, S K Warfield, A A Young. A collaborative resource to build consensus for automated left ventricular segmentation of cardiac MR images. Med Image Anal. 2014 Jan;18(1):50-62. doi: 10.1016/j.media.2013.09.001

  3. V Taimouri, A Akhondi-Asl, X Tomas-Fernandez, J M Peters, S P Prabhu, A Poduri, M Takeoka, T Loddenkemper, A M Bergin, C Harini, J R Madsen, S K Warfield. Electrode localization for planning surgical resection of the epileptogenic zone in pediatric epilepsy. Int J Comput Assist Radiol Surg. 2014 Jan;9(1):91-105. doi:10.1007/s11548-013-0915-6 [PDF]

  4. P Wintermark, A Hansen, S K Warfield, D Dukhovny, J S Soul. Near-infrared spectroscopy versus magnetic resonance imaging to study brain perfusion in newborns with hypoxic-ischemic encephalopathy treated with hypothermia. Neuroimage. 2014 Jan 15;85 Pt 1:287-93. doi: 10.1016/j.neuroimage.2013.04.072

  5. C F Benjamin, J M Singh, S P Prabhu, S K Warfield. Optimization of tractography of the optic radiations. Hum Brain Mapp. 2014 Feb;35(2):683-97. doi: 10.1002/hbm.22204 [PDF]

  6. M Taquet, B Scherrer., O Commowick, J M Peters, M Sahin, B Macq B., SK Warfield. A Mathematical Framework for the Registration and Analysis of Multi-Fascicle Models for Population Studies of the Brain Microstructure, IEEE Trans Med Imaging, 2014 Feb; 33(2):504-17. [WWW] [PDF]

  7. D K Thompson, K J Lee, G F Egan, S K Warfield, L W Doyle, P J Anderson, T E Inder. Regional white matter microstructure in very preterm infants: Predictors and 7 year outcomes. Cortex. 2014 Mar;52:60-74. doi: 10.1016/j.cortex.2013.11.010.

  8. A Hunold, J Haueisen, B Ahtam, C Doshi, C Harini, S Camposano, SK Warfield, PE Grant, Y Okada, C Papadelis. Localization of the epileptongenic foci in tuberous sclerosis complex: a pediatric case report. Front Hum Neurosci. 2014 Mar 26;8:175. [PDF]

  9. A Stamm, B Scherrer, O Commonwick, C Barillot, S K Warfield. Fast and robust detection of the optimal number of fascicles in diffusion images using model averaging theory. ISMRM 2014. Abstract [PDF]

  10. A Stamm, B Scherrer, S Baraldo, O Commonwick, S K Warfield. Non central chi estimation of multi-compartment models improves model selection by reducing overfitting. ISMRM 2014 Abstract [PDF]

  11. O Afacan, A Gholipour, RV Mulkern, C Barnewolt, S Bairdain, J Estroff, S Connolly, S K Warfield. Assessment of fetal lung maturation from diffusion weighted MRI at 3T. ISMRM 2014 Abstract [PDF]

  12. A Gholipur, O Afacan, B Scherrer, B Erem, S K Warfield. Diffusion Weighted MRI of Moving Subjects based on Motion-Induced Random Oversampling. ISMRM 2014. Abstract [PDF]

  13. A Gholipour, O Afacan, I Aganj, S K Warfield. Super-Resolution MRI Reconstruction in Image, Frequency, and Wavelet Domains. ISMRM 2014. Abstract [PDF]

  14. B Scherrer, A Gholipour, M Sahin, S P Prabhu, S K Warfield. Super-resolution multi-fascicle imaging reveals the presence of both radial and tangential diffusion in the mature cortex using a clinical scanner. ISMRM 2014. Abstract [PDF]

  15. B Scherrer, M Taquet, M Sahin, S P Prabhu, S K Warfield. A novel biophysical model that characterizes the distribution of anisotropic micro-structural environments with DWI (DIAMOND). ISMRM 2014. Abstract [PDF]

  16. B Scherrer, M Taquet, M Sahin, S P Prabhu, S K Warfield. Quantitative evaluation of biophysical models of the diffusion with in vivo data by assessment of the generalization error. ISMRM 2014. Abstract [PDF]

  17. A Akhondi-Asl, O Afacan, R V Mulkern, S K Warfield. T2-relaxometry for Myelin Water Fraction Estimation using a Mixture of Wald Distributions. ISMRM 2014. Abstract [PDF]

  18. M Freiman, O Afacan, R V Mulkern, S K Warfield. Simultaneous Model Estimation and Image Reconstruction (SMEIR) to improve Multi b-Value body Diffusion-Weighted imaging. ISMRM 2014. Abstract [PDF]

  19. S Gorthi, A Akhondi-Asl, J P Thiran, S K Warfield. Optimal MAP Parameters Estimation in STAPLE - Learning from Performance Parameters versus Image Similarity Information. MICCAI Workshop on Machine Learning in Medical Imaging, 2014. [PDF]

  20. B Erem, O Afacan, A Gholipour, S J Prabhu, S K Warfield. A System Identification Approach to Estimating a Dynamic Model of Head Motion for MRI Motion Correction. MICCAI Workshop on IntellMR, 2014. [PDF]

  21. A Gholipour, C Limperopoulos, S Clancy, C Clouchoux, A Akhondi-Asl, J A Estroff, and S K Warfield. Construction of a Deformable Spatiotemporal MRI Atlas of the Fetal Brain: Evaluation of Similarity Metrics and Deformation Models. MICCAI 2014. [PDF]

  22. A Akhondi-Asl, O Afacan, R V Mulkern, S K Warfield. T2 -Relaxometry for Myelin Water Fraction Extraction Using Wald Distribution and Extended Phase Graph. MICCAI 2014. [PDF]

  23. S Kurugol, M Freiman, O Afacan, J M Perez-Rossello, M J Callahan, S K Warfield. Spatially-Constrained Probability Distribution Model of Incoherent Motion (SPIM) in Diffusion Weighted MRI Signals of Crohn's Disease. MICCAI Workshop on Computational and Clinical Applications in Abdominal Imaging, 2014. [PDF]

  24. M Taquet, B Scherrer, J M Peters, S P Prabhu, S K Warfield. A Fully Bayesian Inference Framework for Population Studies of the Brain Microstructure. MICCAI 2014. [PDF]

  25. M Taquet, J M Peters, S K Warfield. Four Neuroimaging Questions that P-Values Cannot Answer (and Bayesian Analysis Can). MICCAI Workshop on Bayesian and Graphical Models for Biomedical Imaging (BAMBI'14). [PDF]

  26. D E Hyde, F H Duffy, S K Warfield. Voxel Based Dipole Orientation Constraints for Distributed Current Estimation. IEEE Transactions on Biomedical Engineering 2014 Jul; 61(7): 2028-2040. [PDF]

  27. R O Suarez, V Taimouri, K Boyer, C Vega, A A Rotenberg, J R Madsen, T Loddenkemper, D H Frank, S Prabhu, S K Warfield. Passive fMRI mapping of language function for pediatric epilepsy surgery: validation using Wada, ECS, and FMAER. Epilepsy Research. 2014 Dec;108(10):1874-88. [PDF]

  28. A Akhondi-Asl, L Hoyte, ME Lockhart, SK Warfield. A logarithmic opinion pool based STAPLE algorithm for the fusion of segmentations with associated reliability weights. IEEE Trans Med Imaging. 2014 Oct;33(10):1997-2009. doi: 10.1109/TMI.2014.2329603. [PDF]

  29. C Siversson, A Akhondi-Asl, S Bixby, YJ Kim, SK Warfield. Three-dimensional hip cartilage quality assessment of morphology and dGEMRIC by planar maps and automated segmentation. Osteoarthritis Cartilage. 2014 Oct;22(10):1511-5. doi: 10.1016/j. [PDF]

  30. A Gholipour, EY Lee, SK Warfield. The anatomy and art of writing a successful grant application: a practical step-by-step approach. Pediatr Radiol. 2014. Dec;44(12):1512-7. doi: 10.1007/s00247-014-3051-8. [PDF]