Commonwick Publications

  1. A Stamm, B Scherrer, S Baraldo, O Commonwick, S K Warfield. Non central chi estimation of multi-compartment models improves model selection by reducing overfitting. ISMRM 2014 Abstract [PDF]

  2. A Stamm, B Scherrer, O Commonwick, C Barillot, S K Warfield. Fast and robust detection of the optimal number of fascicles in diffusion images using model averaging theory. ISMRM 2014. Abstract [PDF]

  3. M Taquet, B Scherrer., O Commowick, J M Peters, M Sahin, B Macq B., S K Warfield. A Mathematical Framework for the Registration and Analysis of Multi-Fascicle Models for Population Studies of the Brain Microstructure, IEEE Trans Med Imaging, 2013.[WWW] [PDF]

  4. R O Suarez, O Commowick, S P Prabhu, S K Warfield. Automated delineation of white matter fiber tracts with a multiple region-of-interest approach. Neuroimage, 2012, in press. [WWW] [doi: 10.1016/j.neuroimage.2011.11.043] [PDF]

  5. O Commowick and S K Warfield. Estimation of Inferential Uncertainty in Assessing Expert Segmentation Performance from STAPLE. IEEE Trans Med Imaging, 29(3):771-80 2010. [WWW] [doi: 10.1016/j.pediatrneurol.2009.08.001] [PDF]

  6. M Krishnan, O Commowick, S S Jeste, N Weisenfeld, A Hans, M Gregas, M Sahin, and S K Warfield. Diffusion features of white matter in Tuberous Sclerosis Complex assessed with tractography. Pediatric Neurology, 42(2):101-6 2010. [WWW] [doi: 10.1016/j.pediatrneurol.2009.08.001] [PDF]

  7. O Commowick, S K Warfield and G Malandain. Using Frankenstein's Creature Paradigm to Build a Patient Specific Atlas. In Proceedings of the 12th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI'09), volume 5762 of LNCS, pages 993-1000, September 2009. [PDF]

  8. O Commowick and S K Warfield. Estimation of inferential uncertainty in assessing expert segmentation performance from STAPLE. Inf Process Med Imaging., 21:701-12 2009. [WWW]

  9. O Commowick and S K Warfield. A Continuous STAPLE for Scalar, Vector and Tensor Images: An Application to DTI Analysis. IEEE TMI, 28(6):838-846 2009. [WWW] [doi: 10.1109/TMI.2008.2010438] [PDF]

  10. O Commowick, P Fillard, O Clatz, and S K Warfield. Detection of DTI White Matter Abnormalities in Multiple Sclerosis Patients.Med Image Comput Comput Assist Interv Int Conf Med Image Comput Comput Assist Interv., 11(Pt 1):975-82 2008. [WWW] [PDF]

  11. O Commowick, V Gregoire, and G Malandain. Atlas-based delineation of lymph node levels in head and neck computed tomography images. Radiother Oncol., 87(2):281-9 2008 [WWW] [doi: 10.1016/j.radonc.2008.01.018]

  12. O Commowick, V Arsigny, A Isambert, J Costa, F Dhermain, F Bidault, P Y Bondiau, N Ayache, and G Malandain. An efficient locally affine framework for the smooth registration of anatomical structures. Med Image Anal., 12(4):427-41 2008 [WWW] [doi: 10.1016/

  13. A Isambert, F Dhermain, F Bidault, O Commowick, P Y Bondiau, G Malandain, and D Lefkopoulos. Evaluation of an atlas-based automatic segmentation software for the delineation of brain organs at risk in a radiation therapy clinical context. Radiother Oncol., 87(1):93-9 2008 [WWW] [doi: 10.1016/j.radonc.2007.11.030]

  14. O Commowick, and G Malandain. Efficient selection of the most similar image in a database for critical structures segmentation. Med Image Comput Comput Assist Interv Int Conf Med Image Comput Comput Assist Interv., 10(Pt 2): 203-10 2007 [WWW]

  15. V Arsigny, O Commowick, X Pennec, and N Ayache. A log-Euclidean framework for statistics on diffeomorphisms. Med Image Comput Comput Assist Interv Int Conf Med Image Comput Comput Assist Interv., 9(Pt 1): 924-31 2006 [WWW]

  16. P Y Bondiau, G Malandain, S Chanalet, P Y Marcy, J L Habrand, F Fauchon, P Paquis, A Courdi, O Commowick, I Rutten, and N Ayache. Atlas-based automatic segmentation of MR images: validation study on the brainstem in radiotherapy context. Int J Radiat Oncol Biol Phys., 61(1): 289-98 January 2005 [WWW] [doi: 10.1016/j.ijrobp.2004.08.055]

  17. O Commowick, R Stefanescu, P Fillard, V Arsigny, N Ayache, X Pennec, and G Malandain. Incorporating statistical measures of anatomical variability in atlas-to-subject registration for conformal brain radiotherapy. Med Image Comput Comput Assist Interv Int Conf Med Image Comput Comput Assist Interv., 8(Pt 2): 927-34 2005 [WWW]