Akhondi-Asl Publications


  1. A Gholipour, C Limperopoulos, S Clancy, C Clouchoux, A Akhondi-Asl, J A Estroff, and S K Warfield. Construction of a Deformable Spatiotemporal MRI Atlas of the Fetal Brain: Evaluation of Similarity Metrics and Deformation Models. MICCAI 2014. [PDF]

  2. C Siversson, A Akhondi-Asl, S Bixby, YJ Kim, SK Warfield. Three-dimensional hip cartilage quality assessment of morphology and dGEMRIC by planar maps and automated segmentation. Osteoarthritis Cartilage. 2014 Oct;22(10):1511-5. doi: 10.1016/j. [PDF]

  3. A Akhondi-Asl, O Afacan, R V Mulkern, S K Warfield. T2 -Relaxometry for Myelin Water Fraction Extraction Using Wald Distribution and Extended Phase Graph. MICCAI 2014. [PDF]

  4. A Akhondi-Asl, L Hoyte, ME Lockhart, SK Warfield. A logarithmic opinion pool based STAPLE algorithm for the fusion of segmentations with associated reliability weights. IEEE Trans Med Imaging. 2014 Oct;33(10):1997-2009. doi: 10.1109/TMI.2014.2329603. [PDF]

  5. A Akhondi-Asl, O Afacan, R V Mulkern, S K Warfield. T2-relaxometry for Myelin Water Fraction Estimation using a Mixture of Wald Distributions. ISMRM 2014. Abstract [PDF]

  6. V Taimouri, A Akhondi-Asl, X Tomas-Fernandez, J M Peters, S P Prabhu, A Poduri, M Takeoka, T Loddenkemper, A M Bergin, C Harini, J R Madsen, S K Warfield. Electrode localization for planning surgical resection of the epileptogenic zone in pediatric epilepsy. Int J Comput Assist Radiol Surg. 2014 Jan;9(1):91-105. doi:10.1007/s11548-013-0915-6. [PDF]

  7. A Akhondi-Asl, S K Warfield. Simultaneous Truth and Performance Level Estimation Through Fusion of Probabilistic Segmentations. IEEE Trans Med Imaging. 2013 June 4, in press. [PDF]

  8. A Akhondi-Asl, S K Warfield. Estimation of the prior distribution of ground truth in the STAPLE algorithm: an empirical Bayesian approach. Med Image Comput Comput Assist Interv. 2012;15(Pt 1):593-600. [PDF]

  9. O Commowick, A Akhondi-Asl, S K Warfield. Estimating A Reference Standard Segmentation with Spatially Varying Performance Parameters: Local MAP STAPLE. IEEE Trans Med Imaging, 2012, in press. [WWW] [doi: 10.1109/TMI.2012.2197406]

  10. A Gholipour, A Akhondi-Asl, J A Estroff, S K Warfield. Multi-atlas multi-shape segmentation of fetal brain MRI for volumetric and morphometric analysis of ventriculomegaly. Neuroimage, 60(3):1819-31, 2012. [WWW] [doi: 10.1016/j.neuroimage.2012.01.128]

  11. A Akhondi-asl, A Hans, B Scherrer, J M Peters and S K Warfield. Whole brain group network analysis using network bias and variance parameters. ISBI 2012, in press. [PDF]

  12. A Akhondi-Asl, A Hans, B Scherrer, J M Peters, S K Warfield. Whole brain connectivity analysis using resting state functional MRI in pediatric TSC patients. International Society of Magnetic Resonance in Medicine Annual Meeting (ISMRM 2012), 2012, in press. [PDF]

  13. A Akhondi-asl and S K Warfield. Cortical brain structures segmentation using constrained optimization and intensity coupling. ISBI 2011, pp. 2022-2025. [PDF]

  14. A Akhondi-Asl, K Jafari-Khouzani, K Elisevich, H Soltanian-Zadeh. Hippocampal volumetry for lateralization of temporal lobe epilepsy: automated versus manual methods. Neuroimage. 54 Suppl 1: S218-26, 2011. [WWW] [doi: 10.1016/j.neuroimage.2010.03.066]

  15. A Akhondi-Asl, and H Soltanian-Zadeh. Two-stage multishape segmentation of brain structures using image intensity, tissue type, and location information. Medical Physics, 37(8):4501-4516 2010. [WWW] [doi: 10.1118/1.3459018]

  16. P B Bijari, A Akhondi-Asl, and H Soltanian-Zadeh. Three-Dimensional Coupled-Object Segmentation Using Symmetry and Tissue Type Information. Comput Med Imaging Graph., 34(3): 236-49 April 2010. [WWW] [doi: 10.1016/j.compmedimag.2009.10.002]

  17. S E Mahmoudi, A Akhondi-Asl, R Rahmani, S Faghih-Roohi, V Taimouri, A Sabouri, and H Soltanian-Zadeh. Web-Based, Interactive, 2D/3D Medical Image Processing and Visualization Software. Comput Methods Programs Biomed., 98(2): 172-82 May 2010 [WWW] [doi: 10.1016/j.cmpb.2009.11.012]

  18. A Akhondi-Asl and H Soltanian-Zadeh. Effect of Number of Coupled Structures on the Segmentation of Brain Structures. Journal of Signal Processing Systems, 54(1-3): 215-230 January 2009.

  19. A Akhondi-Asl, K Jafari-Khouzani, K Elisevich, and H Soltanian-Zadeh. Automatic Segmentation of Hippocampus for the Lateralization in Temporal Lobe Epilepsy. In: Biomedical Imaging: From Nano to Macro (ISBI), 2010.

  20. A Ray, A Akhondi-Asl, K Elisevich and H Soltanian-Zadeh. Diffusion Tensor Imaging of Parahippocampal Gyrus As A Lateralizing Tool In Intractable Temporal Lobe Epilepsy. EPILEPSIA, 50: 74-75 2009.

  21. A Akhondi-Asl and H Soltanian-Zadeh. Constrained Optimization of Nonparametric Entropy-Based Segmentation of Brain Structures. In: Biomedical Imaging: From Nano to Macro (ISBI), p. 41-44, 2008.

  22. A Akhondi-Asl and H Soltamian-Zadeh. Nonparametric Entropy-Based Coupled Multi-Shape Medical Image Segmentation. In: Biomedical Imaging: From Nano to Macro (ISBI), p. 1200-1203, 2007.